STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM98436.1Pyridine nucleotide-disulfide oxidoreductase; KEGG: pca:Pcar_2295 3.5e-106 probable glutamate synthase small chain K00266; COG: COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases; Psort location: Cytoplasmic, score:9.97. (432 aa)    
Predicted Functional Partners:
gltA
KEGG: gka:GK1431 0. glutamate synthaselarge subunit K00265; COG: COG0069 Glutamate synthase domain 2; Psort location: Cytoplasmic, score:8.96.
 0.999
EDM99350.1
4Fe-4S binding domain protein; KEGG: tte:TTE0893 3.2e-222 nuoF; NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit K00335; COG: COG1145 Ferredoxin; Psort location: Cytoplasmic, score:9.97.
 
 
 0.990
EDN00022.1
ferredoxin--NADP+ reductase, subunit alpha; KEGG: cno:NT01CX_0467 1.2e-78 glutamate synthase, small subunit K00226; COG: COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases; Psort location: Cytoplasmic, score:9.97.
 0.983
EDM98213.1
ferredoxin--NADP+ reductase, subunit alpha; KEGG: cno:NT01CX_0467 5.9e-79 glutamate synthase, small subunit K00226; COG: COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases; Psort location: Cytoplasmic, score:9.97.
 0.983
EDN00711.1
Oxidoreductase NAD-binding domain protein; KEGG: reh:H16_B1359 9.0e-28 paaE2; phenylacetic acid degradation protein E,flavodoxin reductase; COG: COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1; Psort location: Cytoplasmic, score:8.96.
   
 0.964
rnfB
Putative ferredoxin; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.
   
 0.963
pyrD
Dihydroorotate dehydrogenase 1B; Catalyzes the conversion of dihydroorotate to orotate.
 
 0.956
nifJ
KEGG: ctc:CTC01741 0. pyruvate-flavodoxin oxidoreductase K03737; COG: COG1013 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit.
 
 
 0.916
EDM99349.1
Hydrogenase, Fe-only; KEGG: tte:TTE0894 5.2e-183 nuoG; NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G) K00336; COG: COG4624 Iron only hydrogenase large subunit, C-terminal domain.
   
 0.905
EDM99997.1
Glu/Leu/Phe/Val dehydrogenase, dimerization domain protein; KEGG: cno:NT01CX_0097 1.4e-164 NADP-specific glutamate dehydrogenase K00262; COG: COG0334 Glutamate dehydrogenase/leucine dehydrogenase; Psort location: Cytoplasmic, score:9.97; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
  
 0.895
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacteroides capillosus ATCC 29799, P. capillosus ATCC 29799, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799
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