STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM98389.1Resolvase, N-terminal domain protein; COG: COG1961 Site-specific recombinases, DNA invertase Pin homologs; Psort location: Cytoplasmic, score:8.96. (513 aa)    
Predicted Functional Partners:
EDM98388.1
Recombinase; COG: COG1961 Site-specific recombinases, DNA invertase Pin homologs; Psort location: Cytoplasmic, score:8.96.
 
     0.881
EDN00516.1
Recombinase; COG: COG1961 Site-specific recombinases, DNA invertase Pin homologs; Psort location: Cytoplasmic, score:8.96.
  
     0.752
EDM98390.1
Ser/Thr phosphatase family protein; Psort location: Cytoplasmic, score:8.96.
       0.693
EDM98279.1
Hypothetical protein; COG: NOG14267 non supervised orthologous group; Psort location: Cytoplasmic, score:8.96.
  
     0.651
EDN00448.1
Hypothetical protein; COG: NOG16905 non supervised orthologous group; Psort location: Cytoplasmic, score:8.96.
  
     0.634
EDM98387.1
Resolvase, N-terminal domain protein; COG: COG1961 Site-specific recombinases, DNA invertase Pin homologs; Psort location: Cytoplasmic, score:8.96.
 
    
0.593
EDN01936.1
COG: COG4824 Phage-related holin (Lysis protein).
 
    0.585
EDN00439.1
Hypothetical protein; COG: NOG18822 non supervised orthologous group.
  
     0.539
EDM98272.1
Hypothetical protein; COG: NOG18822 non supervised orthologous group.
  
     0.535
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacteroides capillosus ATCC 29799, P. capillosus ATCC 29799, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.