STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM98210.1Hypothetical protein; Psort location: CytoplasmicMembrane, score:10.00. (249 aa)    
Predicted Functional Partners:
EDM98208.1
KEGG: fal:FRAAL1877 5.7e-42 putative ABC transporter ATP-binding protein; COG: COG1131 ABC-type multidrug transport system, ATPase component.
  
  0.869
EDM98209.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score:10.00.
      
0.718
EDM98211.1
KEGG: ctc:CTC00159 7.7e-54 sensory transduction protein kinase; COG: COG0642 Signal transduction histidine kinase; Psort location: CytoplasmicMembrane, score:7.88.
  
    0.673
EDN01898.1
KEGG: afu:AF1021 2.0e-30 ABC transporter, ATP-binding protein K02017; COG: COG1131 ABC-type multidrug transport system, ATPase component; Psort location: Cytoplasmic, score:9.12.
  
  0.516
EDN01672.1
KEGG: rha:RHA1_ro06063 2.4e-34 probable ABC transporter, ATP-binding component K01990; COG: COG1131 ABC-type multidrug transport system, ATPase component; Psort location: CytoplasmicMembrane, score:7.88.
  
  0.516
EDN01312.1
ABC transporter, ATP-binding protein; KEGG: ava:Ava_4151 4.1e-39 ABC transporter-like K01990; COG: COG1131 ABC-type multidrug transport system, ATPase component; Psort location: CytoplasmicMembrane, score:7.88.
  
  0.516
EDN00949.1
KEGG: noc:Noc_2142 7.1e-51 ABC transporter, ATPase subunit; COG: COG1131 ABC-type multidrug transport system, ATPase component; Psort location: Cytoplasmic, score:9.12.
  
  0.516
EDN00574.1
ABC transporter, ATP binding protein; KEGG: ava:Ava_3286 4.5e-26 ABC transporter-like K01990; COG: COG1131 ABC-type multidrug transport system, ATPase component; Psort location: Cytoplasmic, score:9.12.
  
  0.516
EDN00368.1
KEGG: noc:Noc_2142 1.4e-52 ABC transporter, ATPase subunit; COG: COG1131 ABC-type multidrug transport system, ATPase component; Psort location: Cytoplasmic, score:9.12.
  
  0.516
EDM99327.1
KEGG: noc:Noc_2142 2.6e-37 ABC transporter, ATPase subunit; COG: COG1131 ABC-type multidrug transport system, ATPase component; Psort location: Cytoplasmic, score:9.12.
  
  0.516
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacteroides capillosus ATCC 29799, P. capillosus ATCC 29799, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799
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