STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM98029.14Fe-4S binding domain protein; KEGG: eci:UTI89_C1055 2.4e-15 yccM; putative electron transport protein YccM K00168; COG: COG0348 Polyferredoxin; Psort location: CytoplasmicMembrane, score:9.46. (294 aa)    
Predicted Functional Partners:
EDM98026.1
Redoxin family protein; KEGG: reh:H16_A0306 4.4e-05 bcp; peroxiredoxin K00435; COG: NOG21791 non supervised orthologous group.
 
    0.881
EDM98085.1
Antioxidant, AhpC/TSA family; KEGG: reh:H16_A0306 6.6e-09 bcp; peroxiredoxin K00435; COG: COG0526 Thiol-disulfide isomerase and thioredoxins.
 
     0.763
EDM98401.1
4Fe-4S binding domain protein; KEGG: mth:MTH1553 3.2e-08 tungsten formylmethanofuran dehydrogenase, subunit H K00204; COG: COG1145 Ferredoxin.
 
 
 0.628
EDN00714.1
4Fe-4S binding domain protein; KEGG: cch:Cag_0580 4.0e-78 glutamate synthase (NADPH) small chain K00264; COG: COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases; Psort location: Cytoplasmic, score:9.97.
  
 
 0.610
EDN00661.1
Putative selenate reductase, YgfK subunit; KEGG: eci:UTI89_C3263 3.0e-210 ygfK; hypothetical protein YgfK K05299; COG: COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases; Psort location: Cytoplasmic, score:9.97.
  
 
 0.606
EDM98030.1
Hypothetical protein; COG: NOG13733 non supervised orthologous group; Psort location: Cytoplasmic, score:8.96.
       0.491
EDM98031.1
Hypothetical protein; KEGG: hma:rrnAC3152 0.0043 atpG; vacuolar (H+)-ATPase G subunit K02121; COG: COG4905 Predicted membrane protein; Psort location: CytoplasmicMembrane, score:9.16.
       0.491
EDN00734.1
4Fe-4S binding domain protein; KEGG: dsy:DSY0356 1.9e-25 dmsB; putative anaerobic DMSO reductase chain B iron-sulfur subunit K00369; COG: COG0437 Fe-S-cluster-containing hydrogenase components 1; Psort location: CytoplasmicMembrane, score:9.82.
  
  
 0.489
EDN01224.1
4Fe-4S binding domain protein; KEGG: cno:NT01CX_1699 4.1e-13 hydrogenase (Fe) large chain K00532; COG: COG5015 Uncharacterized conserved protein; Psort location: Cytoplasmic, score:8.96.
  
 
 0.455
EDM99625.1
Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.
  
 
 0.455
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacteroides capillosus ATCC 29799, P. capillosus ATCC 29799, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799
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