STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM97865.1Hypothetical protein; KEGG: fal:FRAAL1877 1.1e-10 putative ABC transporter ATP-binding protein; COG: COG1131 ABC-type multidrug transport system, ATPase component; Psort location: Cytoplasmic, score:8.96. (156 aa)    
Predicted Functional Partners:
EDN01899.1
KEGG: bcz:BCZK3833 1.1e-13 transcriptional regulator, GntR family; COG: COG1725 Predicted transcriptional regulators; Psort location: Cytoplasmic, score:8.96.
 
    0.793
EDN00948.1
Hypothetical protein; COG: COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component; Psort location: CytoplasmicMembrane, score:10.00.
  
 0.787
EDN00367.1
Hypothetical protein; COG: COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component; Psort location: CytoplasmicMembrane, score:10.00.
  
 0.787
EDM97867.1
KEGG: bcz:BCZK3111 0.00032 transcriptional regulator, GntR family; COG: COG1725 Predicted transcriptional regulators; Psort location: Cytoplasmic, score:8.96.
  
    0.783
EDM97864.1
Hypothetical protein; KEGG: pha:PSHAa1096 1.5e-16 uvrD; DNA helicase II K01529; COG: COG0210 Superfamily I DNA and RNA helicases.
  
    0.774
EDM97866.1
Hypothetical protein; COG: NOG16845 non supervised orthologous group; Psort location: CytoplasmicMembrane, score:10.00.
       0.774
EDM97863.1
Hypothetical protein.
       0.773
EDN01897.1
Hypothetical protein; COG: NOG16845 non supervised orthologous group; Psort location: CytoplasmicMembrane, score:10.00.
 
   
 0.753
EDM99326.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score:10.00.
  
  0.521
EDM99315.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score:10.00.
  
  0.521
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacteroides capillosus ATCC 29799, P. capillosus ATCC 29799, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.