STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM97954.1CorA-like protein; COG: COG0598 Mg2+ and Co2+ transporters; Psort location: Cytoplasmic, score:8.96. (308 aa)    
Predicted Functional Partners:
EDM97953.1
Hypothetical protein.
       0.590
EDN00119.1
Hypothetical protein; COG: NOG23778 non supervised orthologous group.
  
    0.516
EDM99863.1
YigZ family protein; KEGG: ctc:CTC02216 5.2e-32 thymidylate synthase K00560; COG: COG1739 Uncharacterized conserved protein; Psort location: Cytoplasmic, score:8.96.
  
    0.511
EDN01275.1
Pyridoxamine 5'-phosphate oxidase family protein; COG: NOG39189 non supervised orthologous group.
   
  
 0.434
EDN00208.1
Hypothetical protein; COG: COG2384 Predicted SAM-dependent methyltransferase; Psort location: Cytoplasmic, score:8.96.
   
    0.430
EDN00121.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score:9.46.
  
     0.414
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacteroides capillosus ATCC 29799, P. capillosus ATCC 29799, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.