STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM97970.1Hypothetical protein; Psort location: CytoplasmicMembrane, score:9.46. (195 aa)    
Predicted Functional Partners:
EDM97971.1
Hypothetical protein; COG: COG3655 Predicted transcriptional regulator.
       0.733
EDM97972.1
Hypothetical protein; Psort location: Cytoplasmic, score:8.96.
       0.732
EDM97973.1
Hypothetical protein.
       0.732
EDM97974.1
Hypothetical protein; KEGG: chu:CHU_1335 1.9e-10 CHU large protein; endoglucanase-related protein, glucosyl hydrolase family 9 protein K01238; COG: NOG16349 non supervised orthologous group.
       0.732
EDM97975.1
Hypothetical protein; KEGG: mmr:Mmar10_2493 2.5e-05 serralysin K01406; COG: NOG16349 non supervised orthologous group; Psort location: Extracellular, score:9.65.
       0.547
cobB-2
Transcriptional regulator, Sir2 family; NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form; Belongs to the sirtuin family. Class U subfamily.
       0.489
EDM97976.1
Hypothetical protein; Psort location: Cytoplasmic, score:8.96.
       0.430
EDM97977.1
Hypothetical protein; KEGG: zmo:ZMO0053 2.3e-13 pcaD; putative beta-ketoadipate enol-lactone hydrolase K01055; COG: COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily).
       0.430
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacteroides capillosus ATCC 29799, P. capillosus ATCC 29799, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.