STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM97711.1Flavin reductase; KEGG: oih:OB3182 1.4e-05 NAD(P)H oxidoreductase K00355; COG: COG0655 Multimeric flavodoxin WrbA. (179 aa)    
Predicted Functional Partners:
EDM97713.1
Hypothetical protein.
 
     0.871
EDM97712.1
Hypothetical protein; KEGG: eci:UTI89_C1599 3.1e-34 hypothetical protein YcjY; COG: COG1073 Hydrolases of the alpha/beta superfamily.
 
    0.822
EDM97714.1
Cupin domain protein; KEGG: lsa:LSA1190 3.3e-30 putative 4-carboxymuconolactone decarboxylase K01607; COG: COG1917 Uncharacterized conserved protein, contains double-stranded beta-helix domain.
 
    0.813
EDM97710.1
Bacterial transferase hexapeptide repeat protein; KEGG: bfr:BF1908 1.7e-56 acetyl transferase K00680; COG: KOG4750 Serine O-acetyltransferase; Psort location: Cytoplasmic, score:9.26.
       0.775
EDM97709.1
KEGG: shn:Shewana3_3435 1.7e-16 transcriptional regulator, LysR family K06022; COG: COG0583 Transcriptional regulator; Psort location: Cytoplasmic, score:9.97; Belongs to the LysR transcriptional regulatory family.
 
     0.613
EDM97800.1
Hypothetical protein; KEGG: rsp:RSP_3191 6.1e-63 fprA; flavodoxin; COG: COG0426 Uncharacterized flavoproteins; Psort location: Cytoplasmic, score:9.26.
  
 
  0.581
EDM99160.1
Hypothetical protein; COG: NOG31153 non supervised orthologous group.
  
 
  0.421
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacteroides capillosus ATCC 29799, P. capillosus ATCC 29799, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799
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