STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM97716.1Response regulator receiver domain protein; KEGG: fal:FRAAL1304 1.9e-11 putative protein-glutamate methylesterase; COG: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain. (199 aa)    
Predicted Functional Partners:
EDM98859.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: syn:slr2104 3.8e-63 hik22; two-component hybrid histidine kinase K02486; COG: COG0642 Signal transduction histidine kinase; Psort location: CytoplasmicMembrane, score:7.88.
  
 0.993
EDM98501.1
HD domain protein; KEGG: ava:Ava_1777 1.3e-20 metal dependent phosphohydrolase, HD region with response regulator receiver modulation K07814; COG: COG3437 Response regulator containing a CheY-like receiver domain and an HD-GYP domain; Psort location: Cytoplasmic, score:8.96.
  
 0.972
EDM97718.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: hne:HNE_2012 2.3e-19 glnL; nitrogen regulation protein NR(II); COG: COG0642 Signal transduction histidine kinase; Psort location: CytoplasmicMembrane, score:10.00.
 
  
 0.950
EDN01398.1
KEGG: ava:Ava_1030 0.00050 putative diguanylate cyclase (GGDEF domain) K02488; COG: COG2199 FOG: GGDEF domain.
  
 0.941
EDM98872.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: spj:MGAS2096_Spy1752 2.0e-48 ihk; two-component system histidine kinase; COG: COG0642 Signal transduction histidine kinase; Psort location: CytoplasmicMembrane, score:9.82.
  
 0.938
EDM99963.1
HD domain protein; KEGG: ava:Ava_1777 6.1e-45 metal dependent phosphohydrolase, HD region with response regulator receiver modulation K07814; COG: COG3437 Response regulator containing a CheY-like receiver domain and an HD-GYP domain; Psort location: Cytoplasmic, score:9.97.
  
 0.901
EDM97743.1
Hypothetical protein; KEGG: chu:CHU_2979 1.2e-17 conserved hypothetical protein, with TPR repeat; COG: COG4995 Uncharacterized protein conserved in bacteria; Psort location: CytoplasmicMembrane, score:9.27.
    
 0.885
EDN01882.1
HTH domain protein; KEGG: eci:UTI89_C2435 5.2e-64 yeiI; hypothetical sugar kinase YeiI K00852; COG: COG0524 Sugar kinases, ribokinase family; Psort location: Cytoplasmic, score:9.26.
  
 0.867
EDM99685.1
Hypothetical protein.
    
 0.771
EDM99964.1
Hypothetical protein; KEGG: cvi:CV0882 2.3e-07 probable sensor/response regulator hybrid protein; COG: COG0642 Signal transduction histidine kinase.
  
 0.739
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacteroides capillosus ATCC 29799, P. capillosus ATCC 29799, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.