STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM97718.1ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: hne:HNE_2012 2.3e-19 glnL; nitrogen regulation protein NR(II); COG: COG0642 Signal transduction histidine kinase; Psort location: CytoplasmicMembrane, score:10.00. (491 aa)    
Predicted Functional Partners:
EDM98859.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: syn:slr2104 3.8e-63 hik22; two-component hybrid histidine kinase K02486; COG: COG0642 Signal transduction histidine kinase; Psort location: CytoplasmicMembrane, score:7.88.
 
 
 0.954
EDM97716.1
Response regulator receiver domain protein; KEGG: fal:FRAAL1304 1.9e-11 putative protein-glutamate methylesterase; COG: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain.
 
  
 0.950
EDM98501.1
HD domain protein; KEGG: ava:Ava_1777 1.3e-20 metal dependent phosphohydrolase, HD region with response regulator receiver modulation K07814; COG: COG3437 Response regulator containing a CheY-like receiver domain and an HD-GYP domain; Psort location: Cytoplasmic, score:8.96.
  
 0.938
EDM98872.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: spj:MGAS2096_Spy1752 2.0e-48 ihk; two-component system histidine kinase; COG: COG0642 Signal transduction histidine kinase; Psort location: CytoplasmicMembrane, score:9.82.
 
 
 0.937
EDN01381.1
Response regulator receiver domain protein; KEGG: fal:FRAAL1628 3.0e-43 response regulator in two-component regulatory system; COG: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; Psort location: Cytoplasmic, score:9.97.
  
 
 0.841
EDM98207.1
Response regulator receiver domain protein; KEGG: ava:Ava_3369 9.9e-38 two component transcriptional regulator, winged helix family; COG: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; Psort location: Cytoplasmic, score:9.97.
  
 
 0.835
EDN01915.1
Response regulator receiver domain protein; KEGG: fal:FRAAL1628 2.2e-40 response regulator in two-component regulatory system; COG: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; Psort location: Cytoplasmic, score:9.97.
  
 
 0.834
EDM99790.1
Response regulator receiver domain protein; KEGG: ava:Ava_1878 6.6e-48 two component transcriptional regulator, winged helix family K07659; COG: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; Psort location: Cytoplasmic, score:9.97.
  
 
 0.832
EDN01350.1
Response regulator receiver domain protein; KEGG: fal:FRAAL1628 2.1e-44 response regulator in two-component regulatory system; COG: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; Psort location: Cytoplasmic, score:9.97.
  
 
 0.830
EDM98873.1
Response regulator receiver domain protein; KEGG: fal:FRAAL1628 2.8e-33 response regulator in two-component regulatory system; COG: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; Psort location: Cytoplasmic, score:9.97.
  
 
 0.829
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacteroides capillosus ATCC 29799, P. capillosus ATCC 29799, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799
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