STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS08828.1Arylsulfatase; KEGG: ecj:JW3654 2.9e-109 yidJ; predicted sulfatase/phosphatase; COG: COG3119 Arylsulfatase A and related enzymes; Psort location: Cytoplasmic, score: 8.87. (495 aa)    
Predicted Functional Partners:
EDS08826.1
Anaerobic sulfatase maturase; KEGG: syg:sync_2368 5.4e-23 arylsulfatase regulator; COG: COG0641 Arylsulfatase regulator (Fe-S oxidoreductase); Psort location: Cytoplasmic, score: 8.87.
 
 
 0.947
mftC_2
six-Cys-in-45 modification radical SAM protein; KEGG: syg:sync_2368 3.3e-07 arylsulfatase regulator; COG: COG0641 Arylsulfatase regulator (Fe-S oxidoreductase); Psort location: Cytoplasmic, score: 8.87.
  
 
 0.847
YicJ_1
Transporter, major facilitator family protein; KEGG: eci:UTI89_C4210 7.2e-35 yicJ; hypothetical symporter YicJ K03292; COG: COG2211 Na+/melibiose symporter and related transporters; Psort location: CytoplasmicMembrane, score: 10.00.
     
 0.780
EDS06804.1
Alpha-L-fucosidase; KEGG: cpe:CPE0324 6.4e-137 probable glycosyl hydrolase K01206; COG: COG3669 Alpha-L-fucosidase; Psort location: Cytoplasmic, score: 8.87.
  
   
 0.556
glgC
Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.
   
    0.538
glgD
Glucose-1-phosphate adenylyltransferase, GlgD subunit; KEGG: tma:TM0239 5.7e-81 glucose-1-phosphate adenylyltransferase K00975; COG: COG0448 ADP-glucose pyrophosphorylase; Psort location: Cytoplasmic, score: 8.87; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.
   
    0.538
FabG_5
Putative 3-oxoacyl-[acyl-carrier-protein] reductase; KEGG: gme:Gmet_1601 4.3e-37 3-oxoacyl-(acyl-carrier-protein) reductase K00059; COG: COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); Psort location: Cytoplasmic, score: 9.98; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
 
 0.505
fabG_1
Oxidoreductase, short chain dehydrogenase/reductase family protein; KEGG: ctc:CTC00798 2.3e-54 3-oxoacyl-[acyl-carrier-protein] reductase K00059; COG: COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); Psort location: Cytoplasmic, score: 9.98; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
 
 0.505
fabG_2
Putative 3-oxoacyl-[acyl-carrier-protein] reductase; KEGG: bha:BH2491 2.9e-47 fabG; 3-oxoacyl-(acyl-carrier protein) reductase K00059; COG: COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); Psort location: Cytoplasmic, score: 9.98.
   
 
 0.505
fabG
3-oxoacyl-[acyl-carrier-protein] reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
 
 0.505
Your Current Organism:
Clostridium scindens
NCBI taxonomy Id: 411468
Other names: Clostridium scindens ATCC 35704, [. scindens ATCC 35704, [Clostridium] scindens ATCC 35704
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