Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDS08772.1Hypothetical protein; COG: NOG20173 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87. (339 aa)    
Predicted Functional Partners:
EDS08771.1
Hypothetical protein; COG: COG3843 Type IV secretory pathway, VirD2 components (relaxase).
       0.768
EDS08803.1
Hypothetical protein; KEGG: bme:BMEI1837 0.00077 cellobiose-phosphorylase K00702; COG: COG1621 Beta-fructosidases (levanase/invertase); Psort location: Cytoplasmic, score: 8.87.
  
     0.767
EDS08773.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
       0.746
EDS05726.1
Plasmid recombination enzyme; KEGG: pho:PH0134 1.1e-07 hypothetical protein K01079; COG: COG5022 Myosin heavy chain; Psort location: Cytoplasmic, score: 8.87.
  
     0.574
EDS08312.1
Hypothetical protein; COG: NOG14070 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
  
     0.559
appA_2
ABC transporter, substrate-binding protein, family 5; KEGG: shn:Shewana3_2650 8.1e-10 acetate kinase K00925; COG: COG0747 ABC-type dipeptide transport system, periplasmic component; Psort location: Extracellular, score: 8.61.
  
     0.541
EDS08034.1
KEGG: ljo:LJ1840 0.0063 cell wall-associated serine proteinase K01361; COG: NOG22929 non supervised orthologous group; Psort location: Cellwall, score: 9.99.
  
     0.534
RibZ
Transporter, major facilitator family protein; KEGG: dar:Daro_1499 0.00058 NAD(P) transhydrogenase, beta subunit K00325; COG: COG0477 Permeases of the major facilitator superfamily; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.521
bmr3_2
COG: COG0477 Permeases of the major facilitator superfamily; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.512
sinR
DNA-binding helix-turn-helix protein; KEGG: mmo:MMOB3450 0.00011 dam; adenine-specific DNA methyltransferase K06223; COG: COG1396 Predicted transcriptional regulators.
  
     0.488
Your Current Organism:
Clostridium scindens
NCBI taxonomy Id: 411468
Other names: Clostridium scindens ATCC 35704, [. scindens ATCC 35704, [Clostridium] scindens ATCC 35704
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