Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDS08815.1Acetyltransferase, GNAT family; KEGG: spb:M28_Spy1774 8.2e-18 acetyltransferase K00680; COG: COG3981 Predicted acetyltransferase; Psort location: Cytoplasmic, score: 8.87. (179 aa)    
Predicted Functional Partners:
EDS08816.1
Hypothetical protein; COG: NOG38290 non supervised orthologous group.
 
     0.801
EDS08814.1
Acetyltransferase, GNAT family; KEGG: tth:TTC0848 1.0e-12 acetyltransferase K00680; COG: COG0454 Histone acetyltransferase HPA2 and related acetyltransferases.
       0.634
dfx_2
Superoxide reductase; KEGG: mta:Moth_1285 2.2e-10 desulfoferrodoxin K00518; COG: COG2033 Desulfoferrodoxin; Psort location: Cytoplasmic, score: 8.87.
 
      0.633
bltD
KEGG: baa:BA_3057 3.3e-14 acetyltransferase (GNAT) family K00663; COG: COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins; Psort location: Cytoplasmic, score: 8.87.
     
 0.534
EDS08811.1
Hypothetical protein; Psort location: Extracellular, score: 8.82.
       0.460
EDS08812.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.26.
       0.460
Your Current Organism:
Clostridium scindens
NCBI taxonomy Id: 411468
Other names: Clostridium scindens ATCC 35704, [. scindens ATCC 35704, [Clostridium] scindens ATCC 35704
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