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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WcaJKEGG: tcx:Tcr_1675 1.8e-70 undecaprenyl-phosphate galactosephosphotransferase K03606; COG: COG2148 Sugar transferases involved in lipopolysaccharide synthesis; Psort location: CytoplasmicMembrane, score: 9.99. (485 aa)    
Predicted Functional Partners:
epsJ_1
Glycosyltransferase, group 2 family protein; KEGG: gbe:GbCGDNIH1_2152 2.1e-47 glycosyltransferase K00754; COG: COG0463 Glycosyltransferases involved in cell wall biogenesis; Psort location: Cytoplasmic, score: 8.87.
 
  
 0.977
hyaD
Glycosyltransferase, group 2 family protein; KEGG: gbe:GbCGDNIH1_2152 7.5e-56 glycosyltransferase K00754; COG: COG0463 Glycosyltransferases involved in cell wall biogenesis; Psort location: Cytoplasmic, score: 8.87.
 
  
 0.977
kfoC
KEGG: mxa:MXAN_4621 2.9e-45 glycosyl transferase family protein K00754; COG: COG0463 Glycosyltransferases involved in cell wall biogenesis.
 
  
 0.975
EDS06033.1
Hypothetical protein; COG: COG0399 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; Psort location: Cytoplasmic, score: 8.87.
  
  
 0.973
WbbL
KEGG: hne:HNE_0805 4.1e-39 glycosyl transferase, group 2 family protein K00754; COG: COG1216 Predicted glycosyltransferases.
  
 0.965
EDS08609.1
Glycosyltransferase, group 2 family protein; KEGG: stm:STM2085 7.7e-54 rfbN; LPS side chain defect: rhamnosyl transferase K00754; COG: COG0463 Glycosyltransferases involved in cell wall biogenesis; Psort location: Cytoplasmic, score: 8.87.
 
  
 0.955
EDS06480.1
Polysaccharide biosynthesis protein; COG: COG2244 Membrane protein involved in the export of O-antigen and teichoic acid; Psort location: CytoplasmicMembrane, score: 9.99.
  
  
 0.954
ApbC
Nucleotide-binding protein; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.
  
  
 0.936
brpA_2
Cell envelope-like function transcriptional attenuator common domain protein; KEGG: ctc:CTC02342 0.0065 glycine betaine transport ATP-binding protein K02000; COG: COG1316 Transcriptional regulator.
 
   
 0.895
EDS04860.1
Acyltransferase; KEGG: mlo:mlr8757 6.2e-07 acetyl transferase, nodulation protein NolL K00680; COG: COG3594 Fucose 4-O-acetylase and related acetyltransferases; Psort location: CytoplasmicMembrane, score: 9.99.
  
  
 0.860
Your Current Organism:
Clostridium scindens
NCBI taxonomy Id: 411468
Other names: Clostridium scindens ATCC 35704, [. scindens ATCC 35704, [Clostridium] scindens ATCC 35704
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