Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EDS08635.1Recombinase; COG: NOG23195 non supervised orthologous group. (143 aa)    
Predicted Functional Partners:
EDS08637.1
Hypothetical protein; Psort location: Extracellular, score: 8.82.
 
    0.951
EDS08636.1
Resolvase, N-terminal domain protein; COG: COG1961 Site-specific recombinases, DNA invertase Pin homologs.
 
     0.946
tnpR_2
Resolvase, N-terminal domain protein; COG: COG1961 Site-specific recombinases, DNA invertase Pin homologs; Psort location: Cytoplasmic, score: 8.87.
 
     0.945
EDS08633.1
Hypothetical protein.
 
     0.826
TnpR_1
Recombinase; COG: COG1961 Site-specific recombinases, DNA invertase Pin homologs; Psort location: Cytoplasmic, score: 8.87.
 
     0.765
EDS08667.1
Hypothetical protein; COG: NOG18822 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
  
     0.669
EDS08669.1
Hypothetical protein; COG: NOG36032 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
  
     0.655
EDS08666.1
Hypothetical protein; COG: NOG17855 non supervised orthologous group.
 
     0.619
EDS08638.1
Hypothetical protein.
       0.527
EDS08700.1
Resolvase, N-terminal domain protein; COG: COG1961 Site-specific recombinases, DNA invertase Pin homologs; Psort location: Cytoplasmic, score: 8.87.
 
     0.518
Your Current Organism:
Clostridium scindens
NCBI taxonomy Id: 411468
Other names: Clostridium scindens ATCC 35704, [. scindens ATCC 35704, [Clostridium] scindens ATCC 35704
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