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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS08667.1Hypothetical protein; COG: NOG18822 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87. (333 aa)    
Predicted Functional Partners:
EDS08666.1
Hypothetical protein; COG: NOG17855 non supervised orthologous group.
 
    0.920
hemC
Hydroxymethylbilane synthase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family.
  
  
 0.833
EDS08668.1
Hypothetical protein; COG: NOG22899 non supervised orthologous group.
 
    0.748
EDS08635.1
Recombinase; COG: NOG23195 non supervised orthologous group.
  
     0.669
EDS08669.1
Hypothetical protein; COG: NOG36032 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
 
    
0.669
EDS08637.1
Hypothetical protein; Psort location: Extracellular, score: 8.82.
 
    0.649
EDS08678.1
Hypothetical protein; COG: NOG14267 non supervised orthologous group.
 
    0.619
EDS08636.1
Resolvase, N-terminal domain protein; COG: COG1961 Site-specific recombinases, DNA invertase Pin homologs.
  
    0.612
EDS08665.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
       0.604
EDS07369.1
Hypothetical protein; KEGG: pfl:PFL_3331 0.0029 nudF; ADP-ribose pyrophosphatase K01515; COG: NOG16905 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
 
    0.603
Your Current Organism:
Clostridium scindens
NCBI taxonomy Id: 411468
Other names: Clostridium scindens ATCC 35704, [. scindens ATCC 35704, [Clostridium] scindens ATCC 35704
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