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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS08577.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.87. (439 aa)    
Predicted Functional Partners:
EDS08576.1
Hypothetical protein; KEGG: cpf:CPF_1123 1.3e-16 cell wall-associated serine proteinase K01361; COG: NOG17334 non supervised orthologous group.
       0.782
EDS07556.1
Hypothetical protein; KEGG: ddi:DDB0190674 5.8e-08 hypothetical protein K01146; COG: COG5651 PPE-repeat proteins.
   
 
 0.555
EDS06305.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
   
 
 0.555
EDS08575.1
Hypothetical protein.
       0.533
pfp_2
Phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP- PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions.
  
    0.437
EDS08578.1
Hypothetical protein.
       0.436
Your Current Organism:
Clostridium scindens
NCBI taxonomy Id: 411468
Other names: Clostridium scindens ATCC 35704, [. scindens ATCC 35704, [Clostridium] scindens ATCC 35704
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