Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDS08058.1Hypothetical protein; COG: NOG34170 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87. (247 aa)    
Predicted Functional Partners:
EDS08472.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
 
 
 
 0.737
EDS07977.1
Hypothetical protein; KEGG: rno:309804 1.6e-08 Cdc2l6_predicted; cell division cycle 2-like 6 (CDK8-like) (predicted) K02208; COG: KOG3544 Collagens (type IV and type XIII), and related proteins; Psort location: Cytoplasmic, score: 8.87.
  
 
 0.716
EDS06911.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.99.
 
     0.701
EDS08047.1
Hypothetical protein; KEGG: nph:NP1018A 6.8e-07 atpH; H(+)-transporting two-sector ATPase subunit H.a (A-type ATP synthase) K02121; Psort location: Cytoplasmic, score: 8.87.
  
     0.700
EDS08596.1
Hypothetical protein; COG: COG3291 FOG: PKD repeat; Psort location: Cytoplasmic, score: 8.87.
 
 
 
 0.695
EDS08109.1
Putative stage III sporulation protein AF; COG: NOG13844 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
  
     0.688
EDS06332.1
Tetratricopeptide repeat protein; KEGG: mpe:MYPE6470 1.2e-26 parC; DNA topoisomerase IV subunit A K02621; COG: KOG1181 FOG: Low-complexity; Psort location: Extracellular, score: 7.62.
 
 0.675
EDS08153.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 7.80.
  
     0.674
EDS08609.1
Glycosyltransferase, group 2 family protein; KEGG: stm:STM2085 7.7e-54 rfbN; LPS side chain defect: rhamnosyl transferase K00754; COG: COG0463 Glycosyltransferases involved in cell wall biogenesis; Psort location: Cytoplasmic, score: 8.87.
  
 
 0.654
EDS04944.1
Hypothetical protein; KEGG: rle:RL2226 0.0022 cdsA; putative phosphatidate cytidylyltransferase K00981; COG: NOG07239 non supervised orthologous group; Psort location: CytoplasmicMembrane, score: 9.99.
  
     0.651
Your Current Organism:
Clostridium scindens
NCBI taxonomy Id: 411468
Other names: Clostridium scindens ATCC 35704, [. scindens ATCC 35704, [Clostridium] scindens ATCC 35704
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