| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ParE | dnaK | CLOSCI_00399 | CLOSCI_01190 | DNA gyrase, B subunit, C-terminal domain protein; KEGG: bli:BL00081 1.6e-172 gyrB; DNA gyrase (subunit B) K02470; COG: COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit; Psort location: Cytoplasmic, score: 8.87. | Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.666 |
| ParE | dnaN | CLOSCI_00399 | CLOSCI_01935 | DNA gyrase, B subunit, C-terminal domain protein; KEGG: bli:BL00081 1.6e-172 gyrB; DNA gyrase (subunit B) K02470; COG: COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit; Psort location: Cytoplasmic, score: 8.87. | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.687 |
| ParE | gyrA | CLOSCI_00399 | CLOSCI_01940 | DNA gyrase, B subunit, C-terminal domain protein; KEGG: bli:BL00081 1.6e-172 gyrB; DNA gyrase (subunit B) K02470; COG: COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit; Psort location: Cytoplasmic, score: 8.87. | DNA gyrase, A subunit; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner. | 0.984 |
| ParE | gyrA_2 | CLOSCI_00399 | CLOSCI_00400 | DNA gyrase, B subunit, C-terminal domain protein; KEGG: bli:BL00081 1.6e-172 gyrB; DNA gyrase (subunit B) K02470; COG: COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit; Psort location: Cytoplasmic, score: 8.87. | KEGG: lsl:LSL_0006 7.6e-150 gyrA; DNA gyrase subunit A K01863; COG: COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit; Psort location: Cytoplasmic, score: 8.87. | 0.996 |
| ParE | infB | CLOSCI_00399 | CLOSCI_00406 | DNA gyrase, B subunit, C-terminal domain protein; KEGG: bli:BL00081 1.6e-172 gyrB; DNA gyrase (subunit B) K02470; COG: COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit; Psort location: Cytoplasmic, score: 8.87. | Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | 0.609 |
| ParE | nudC | CLOSCI_00399 | CLOSCI_00401 | DNA gyrase, B subunit, C-terminal domain protein; KEGG: bli:BL00081 1.6e-172 gyrB; DNA gyrase (subunit B) K02470; COG: COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit; Psort location: Cytoplasmic, score: 8.87. | Hydrolase, NUDIX family; KEGG: lpl:lp_3123 2.0e-46 pyrophosphatase (putative) K03659; COG: COG2816 NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding; Psort location: Cytoplasmic, score: 8.87. | 0.650 |
| ParE | recF | CLOSCI_00399 | CLOSCI_01938 | DNA gyrase, B subunit, C-terminal domain protein; KEGG: bli:BL00081 1.6e-172 gyrB; DNA gyrase (subunit B) K02470; COG: COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit; Psort location: Cytoplasmic, score: 8.87. | DNA replication and repair protein RecF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP; Belongs to the RecF family. | 0.717 |
| ParE | rpoC | CLOSCI_00399 | CLOSCI_00846 | DNA gyrase, B subunit, C-terminal domain protein; KEGG: bli:BL00081 1.6e-172 gyrB; DNA gyrase (subunit B) K02470; COG: COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit; Psort location: Cytoplasmic, score: 8.87. | DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.610 |
| ParE | spoIIP | CLOSCI_00399 | CLOSCI_00398 | DNA gyrase, B subunit, C-terminal domain protein; KEGG: bli:BL00081 1.6e-172 gyrB; DNA gyrase (subunit B) K02470; COG: COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit; Psort location: Cytoplasmic, score: 8.87. | Stage II sporulation protein P; COG: NOG13213 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87. | 0.632 |
| ParE | truB | CLOSCI_00399 | CLOSCI_00409 | DNA gyrase, B subunit, C-terminal domain protein; KEGG: bli:BL00081 1.6e-172 gyrB; DNA gyrase (subunit B) K02470; COG: COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit; Psort location: Cytoplasmic, score: 8.87. | tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily. | 0.589 |
| dnaK | ParE | CLOSCI_01190 | CLOSCI_00399 | Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | DNA gyrase, B subunit, C-terminal domain protein; KEGG: bli:BL00081 1.6e-172 gyrB; DNA gyrase (subunit B) K02470; COG: COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit; Psort location: Cytoplasmic, score: 8.87. | 0.666 |
| dnaK | gyrA | CLOSCI_01190 | CLOSCI_01940 | Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | DNA gyrase, A subunit; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner. | 0.715 |
| dnaK | gyrA_2 | CLOSCI_01190 | CLOSCI_00400 | Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | KEGG: lsl:LSL_0006 7.6e-150 gyrA; DNA gyrase subunit A K01863; COG: COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit; Psort location: Cytoplasmic, score: 8.87. | 0.698 |
| dnaK | infB | CLOSCI_01190 | CLOSCI_00406 | Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | 0.502 |
| dnaK | rpoC | CLOSCI_01190 | CLOSCI_00846 | Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.543 |
| dnaN | ParE | CLOSCI_01935 | CLOSCI_00399 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | DNA gyrase, B subunit, C-terminal domain protein; KEGG: bli:BL00081 1.6e-172 gyrB; DNA gyrase (subunit B) K02470; COG: COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit; Psort location: Cytoplasmic, score: 8.87. | 0.687 |
| dnaN | gyrA | CLOSCI_01935 | CLOSCI_01940 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | DNA gyrase, A subunit; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner. | 0.871 |
| dnaN | gyrA_2 | CLOSCI_01935 | CLOSCI_00400 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | KEGG: lsl:LSL_0006 7.6e-150 gyrA; DNA gyrase subunit A K01863; COG: COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit; Psort location: Cytoplasmic, score: 8.87. | 0.436 |
| dnaN | recF | CLOSCI_01935 | CLOSCI_01938 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | DNA replication and repair protein RecF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP; Belongs to the RecF family. | 0.980 |
| dnaN | rpoC | CLOSCI_01935 | CLOSCI_00846 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.441 |