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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS08107.1Stage III sporulation protein AD; COG: NOG13205 non supervised orthologous group; Psort location: CytoplasmicMembrane, score: 9.99. (130 aa)    
Predicted Functional Partners:
SpoIIIAE
Putative stage III sporulation protein AE; COG: NOG06161 non supervised orthologous group; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.995
EDS08106.1
Stage III sporulation protein AC; COG: NOG17863 non supervised orthologous group; Psort location: CytoplasmicMembrane, score: 9.75.
 
  
 0.993
EDS08109.1
Putative stage III sporulation protein AF; COG: NOG13844 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
 
  
 0.991
EDS08105.1
Putative stage III sporulation protein AB; COG: NOG16867 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
 
  
 0.977
EDS08104.1
Stage III sporulation protein AA; COG: COG3854 Uncharacterized protein conserved in bacteria; Psort location: Cytoplasmic, score: 8.87.
 
  
 0.976
EDS08110.1
Putative stage III sporulation protein AG; COG: NOG11553 non supervised orthologous group.
 
  
 0.976
EDS08111.1
Hypothetical protein; KEGG: ccr:CC0365 0.0040 F-type H+-transporting ATPase b chain K02109; COG: NOG17862 non supervised orthologous group.
 
  
 0.945
spoIVA
Stage IV sporulation protein A; COG: NOG05962 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
  
    0.873
yqfC
Sporulation protein YqfC; COG: NOG13846 non supervised orthologous group.
  
  
 0.824
spoIVB
SpoIVB peptidase; KEGG: btl:BALH_3781 9.1e-51 spoIVB; stage IV sporulation protein B; COG: COG0750 Predicted membrane-associated Zn-dependent proteases 1.
 
     0.813
Your Current Organism:
Clostridium scindens
NCBI taxonomy Id: 411468
Other names: Clostridium scindens ATCC 35704, [. scindens ATCC 35704, [Clostridium] scindens ATCC 35704
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