Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDS08109.1Putative stage III sporulation protein AF; COG: NOG13844 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87. (116 aa)    
Predicted Functional Partners:
SpoIIIAE
Putative stage III sporulation protein AE; COG: NOG06161 non supervised orthologous group; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.992
EDS08107.1
Stage III sporulation protein AD; COG: NOG13205 non supervised orthologous group; Psort location: CytoplasmicMembrane, score: 9.99.
 
  
 0.988
EDS08110.1
Putative stage III sporulation protein AG; COG: NOG11553 non supervised orthologous group.
 
  
 0.978
EDS08105.1
Putative stage III sporulation protein AB; COG: NOG16867 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
 
  
 0.972
EDS08106.1
Stage III sporulation protein AC; COG: NOG17863 non supervised orthologous group; Psort location: CytoplasmicMembrane, score: 9.75.
  
  
 0.946
EDS08111.1
Hypothetical protein; KEGG: ccr:CC0365 0.0040 F-type H+-transporting ATPase b chain K02109; COG: NOG17862 non supervised orthologous group.
 
  
 0.928
EDS08104.1
Stage III sporulation protein AA; COG: COG3854 Uncharacterized protein conserved in bacteria; Psort location: Cytoplasmic, score: 8.87.
 
  
 0.890
EDS06316.1
Hypothetical protein; KEGG: bba:Bd1032 0.0026 mepA; hypothetical protein K07261; Psort location: CytoplasmicMembrane, score: 7.63.
  
     0.716
EDS07769.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.87.
  
     0.702
EDS06909.1
LysM domain protein; KEGG: lsl:LSL_0304 0.0019 phage lysin K01185; COG: NOG23722 non supervised orthologous group.
  
    0.696
Your Current Organism:
Clostridium scindens
NCBI taxonomy Id: 411468
Other names: Clostridium scindens ATCC 35704, [. scindens ATCC 35704, [Clostridium] scindens ATCC 35704
Server load: low (8%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.