Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EDS08141.1Hypothetical protein; COG: COG3044 Predicted ATPase of the ABC class; Psort location: Cytoplasmic, score: 8.87. (570 aa)    
Predicted Functional Partners:
rsmD
RNA methyltransferase, RsmD family; KEGG: fnu:FN1329 8.7e-30 methyltransferase K00599; COG: COG0742 N6-adenine-specific methylase; Psort location: Cytoplasmic, score: 8.87.
       0.780
coaD
Pantetheine-phosphate adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family.
       0.780
EDS08144.1
Hypothetical protein; KEGG: ctc:CTC00993 0.0038 V-type sodium ATP synthase subunit G K02121; COG: NOG13209 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
       0.780
proX_4
YbaK/proline--tRNA ligase associated domain protein; KEGG: pfa:PFL0670c 3.0e-10 Bi-functional aminoacyl-tRNA synthetase, putative K01881:K01885; COG: COG3760 Uncharacterized conserved protein.
       0.661
EDS08139.1
Hypothetical protein.
       0.491
maf
Septum formation protein Maf; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.
       0.478
Your Current Organism:
Clostridium scindens
NCBI taxonomy Id: 411468
Other names: Clostridium scindens ATCC 35704, [. scindens ATCC 35704, [Clostridium] scindens ATCC 35704
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