Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EDS08144.1Hypothetical protein; KEGG: ctc:CTC00993 0.0038 V-type sodium ATP synthase subunit G K02121; COG: NOG13209 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87. (209 aa)    
Predicted Functional Partners:
rsmD
RNA methyltransferase, RsmD family; KEGG: fnu:FN1329 8.7e-30 methyltransferase K00599; COG: COG0742 N6-adenine-specific methylase; Psort location: Cytoplasmic, score: 8.87.
  
    0.893
coaD
Pantetheine-phosphate adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family.
       0.830
EDS08141.1
Hypothetical protein; COG: COG3044 Predicted ATPase of the ABC class; Psort location: Cytoplasmic, score: 8.87.
       0.780
zapA
Hypothetical protein; Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division.
  
     0.673
proX_4
YbaK/proline--tRNA ligase associated domain protein; KEGG: pfa:PFL0670c 3.0e-10 Bi-functional aminoacyl-tRNA synthetase, putative K01881:K01885; COG: COG3760 Uncharacterized conserved protein.
       0.661
ftsL_1
COG: COG2919 Septum formation initiator.
  
     0.645
EDS08196.1
Hypothetical protein.
  
     0.623
FtsL_2
Hypothetical protein.
  
     0.607
EDS06654.1
KEGG: cyb:CYB_1515 0.0081 tetratricopeptide repeat/protein kinase domain protein K08884; COG: COG0457 FOG: TPR repeat.
  
     0.604
EDS06439.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.99.
  
     0.597
Your Current Organism:
Clostridium scindens
NCBI taxonomy Id: 411468
Other names: Clostridium scindens ATCC 35704, [. scindens ATCC 35704, [Clostridium] scindens ATCC 35704
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