EDS08221.1 protein (Clostridium scindens) - STRING interaction network

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Score

EDS08221.1

Toxin secretion/phage lysis holin; Psort location: CytoplasmicMembrane, score: 7.80. (172 aa)

Predicted Functional Partners:

lytG

0.793

ltrA_3

0.774

miaB

0.463

Your Current Organism:

Clostridium scindens

NCBI taxonomy Id: 411468
Other names: Clostridium scindens ATCC 35704, [. scindens ATCC 35704, [Clostridium] scindens ATCC 35704

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EDS08221.1	ltrA_3	CLOSCI_00532	CLOSCI_00533	Toxin secretion/phage lysis holin; Psort location: CytoplasmicMembrane, score: 7.80.	Reverse transcriptase (RNA-dependent DNA polymerase); KEGG: rba:RB818 3.0e-25 reverse transcriptase/maturase K00986; COG: COG3344 Retron-type reverse transcriptase; Psort location: Cytoplasmic, score: 8.87.	0.774
EDS08221.1	lytG	CLOSCI_00532	CLOSCI_00531	Toxin secretion/phage lysis holin; Psort location: CytoplasmicMembrane, score: 7.80.	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase; KEGG: cno:NT01CX_2157 9.9e-26 N-acetylmuramoyl-L-alanine amidase CwlL precursor (cellwall hydrolase) (autolysin) K01446; COG: COG1705 Muramidase (flagellum-specific); Psort location: Extracellular, score: 9.55.	0.793
EDS08221.1	miaB	CLOSCI_00532	CLOSCI_00530	Toxin secretion/phage lysis holin; Psort location: CytoplasmicMembrane, score: 7.80.	tRNA-i(6)A37 thiotransferase enzyme MiaB; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine.	0.463
ltrA_3	EDS08221.1	CLOSCI_00533	CLOSCI_00532	Reverse transcriptase (RNA-dependent DNA polymerase); KEGG: rba:RB818 3.0e-25 reverse transcriptase/maturase K00986; COG: COG3344 Retron-type reverse transcriptase; Psort location: Cytoplasmic, score: 8.87.	Toxin secretion/phage lysis holin; Psort location: CytoplasmicMembrane, score: 7.80.	0.774
ltrA_3	lytG	CLOSCI_00533	CLOSCI_00531	Reverse transcriptase (RNA-dependent DNA polymerase); KEGG: rba:RB818 3.0e-25 reverse transcriptase/maturase K00986; COG: COG3344 Retron-type reverse transcriptase; Psort location: Cytoplasmic, score: 8.87.	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase; KEGG: cno:NT01CX_2157 9.9e-26 N-acetylmuramoyl-L-alanine amidase CwlL precursor (cellwall hydrolase) (autolysin) K01446; COG: COG1705 Muramidase (flagellum-specific); Psort location: Extracellular, score: 9.55.	0.780
ltrA_3	miaB	CLOSCI_00533	CLOSCI_00530	Reverse transcriptase (RNA-dependent DNA polymerase); KEGG: rba:RB818 3.0e-25 reverse transcriptase/maturase K00986; COG: COG3344 Retron-type reverse transcriptase; Psort location: Cytoplasmic, score: 8.87.	tRNA-i(6)A37 thiotransferase enzyme MiaB; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine.	0.463
lytG	EDS08221.1	CLOSCI_00531	CLOSCI_00532	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase; KEGG: cno:NT01CX_2157 9.9e-26 N-acetylmuramoyl-L-alanine amidase CwlL precursor (cellwall hydrolase) (autolysin) K01446; COG: COG1705 Muramidase (flagellum-specific); Psort location: Extracellular, score: 9.55.	Toxin secretion/phage lysis holin; Psort location: CytoplasmicMembrane, score: 7.80.	0.793
lytG	ltrA_3	CLOSCI_00531	CLOSCI_00533	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase; KEGG: cno:NT01CX_2157 9.9e-26 N-acetylmuramoyl-L-alanine amidase CwlL precursor (cellwall hydrolase) (autolysin) K01446; COG: COG1705 Muramidase (flagellum-specific); Psort location: Extracellular, score: 9.55.	Reverse transcriptase (RNA-dependent DNA polymerase); KEGG: rba:RB818 3.0e-25 reverse transcriptase/maturase K00986; COG: COG3344 Retron-type reverse transcriptase; Psort location: Cytoplasmic, score: 8.87.	0.780
lytG	miaB	CLOSCI_00531	CLOSCI_00530	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase; KEGG: cno:NT01CX_2157 9.9e-26 N-acetylmuramoyl-L-alanine amidase CwlL precursor (cellwall hydrolase) (autolysin) K01446; COG: COG1705 Muramidase (flagellum-specific); Psort location: Extracellular, score: 9.55.	tRNA-i(6)A37 thiotransferase enzyme MiaB; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine.	0.479
miaB	EDS08221.1	CLOSCI_00530	CLOSCI_00532	tRNA-i(6)A37 thiotransferase enzyme MiaB; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine.	Toxin secretion/phage lysis holin; Psort location: CytoplasmicMembrane, score: 7.80.	0.463
miaB	ltrA_3	CLOSCI_00530	CLOSCI_00533	tRNA-i(6)A37 thiotransferase enzyme MiaB; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine.	Reverse transcriptase (RNA-dependent DNA polymerase); KEGG: rba:RB818 3.0e-25 reverse transcriptase/maturase K00986; COG: COG3344 Retron-type reverse transcriptase; Psort location: Cytoplasmic, score: 8.87.	0.463
miaB	lytG	CLOSCI_00530	CLOSCI_00531	tRNA-i(6)A37 thiotransferase enzyme MiaB; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine.	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase; KEGG: cno:NT01CX_2157 9.9e-26 N-acetylmuramoyl-L-alanine amidase CwlL precursor (cellwall hydrolase) (autolysin) K01446; COG: COG1705 Muramidase (flagellum-specific); Psort location: Extracellular, score: 9.55.	0.479