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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS08229.1Phage tail tape measure protein, TP901 family; KEGG: mmu:19360 0.0048 Rad50; RAD50 homolog (S. cerevisiae); COG: COG5280 Phage-related minor tail protein. (1045 aa)    
Predicted Functional Partners:
EDS08234.1
Hypothetical protein; COG: NOG18351 non supervised orthologous group.
 
     0.876
EDS08228.1
Putative phage tail component domain protein; COG: NOG18823 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
  
   0.862
EDS08655.1
Phage DNA packaging protein; COG: NOG22900 non supervised orthologous group.
 
   0.861
EDS08654.1
Putative phage head-tail adaptor.
 
     0.823
EDS08227.1
Hypothetical protein; COG: NOG18824 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
       0.804
EDS08651.1
Phage major tail protein, phi13 family; COG: NOG11304 non supervised orthologous group.
 
     0.803
EDS08652.1
Hypothetical protein; COG: NOG18352 non supervised orthologous group.
 
     0.802
EDS08650.1
Hypothetical protein; COG: NOG18353 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
 
     0.800
EDS08226.1
Hypothetical protein; COG: NOG18825 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
       0.795
EDS08653.1
Hypothetical protein; COG: NOG18351 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
 
     0.793
Your Current Organism:
Clostridium scindens
NCBI taxonomy Id: 411468
Other names: Clostridium scindens ATCC 35704, [. scindens ATCC 35704, [Clostridium] scindens ATCC 35704
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