STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS08259.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.87. (73 aa)    
Predicted Functional Partners:
EDS08253.1
Hypothetical protein.
       0.757
EDS08254.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
       0.757
EDS08255.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
       0.757
EDS08256.1
DNA N-6-adenine-methyltransferase (Dam); KEGG: sac:SACOL0346 1.1e-40 prophage L54a, N-6-adenine-methyltransferase K00571; COG: NOG18143 non supervised orthologous group.
       0.757
EDS08257.1
Hypothetical protein; KEGG: vvu:VV1_0568 0.0092 NTP pyrophosphohydrolase K03574; Psort location: Cytoplasmic, score: 8.87.
       0.757
EDS08258.1
Hypothetical protein.
       0.757
Dam
D12 class N6 adenine-specific DNA methyltransferase; KEGG: bbr:BB3607 8.9e-21 modification methylase K06223; COG: COG0338 Site-specific DNA methylase; Psort location: Cytoplasmic, score: 8.87.
       0.727
EDS08250.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
       0.726
EDS08251.1
Hypothetical protein; COG: NOG28949 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
       0.726
EDS08252.1
Hypothetical protein.
       0.726
Your Current Organism:
Clostridium scindens
NCBI taxonomy Id: 411468
Other names: Clostridium scindens ATCC 35704, [. scindens ATCC 35704, [Clostridium] scindens ATCC 35704
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.