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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS08291.1Tetratricopeptide repeat protein; KEGG: mth:MTH977 0.00053 endo-1,4-beta-glucanase related protein K01179; COG: COG3291 FOG: PKD repeat; Psort location: Cytoplasmic, score: 8.87. (452 aa)    
Predicted Functional Partners:
EDS06305.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
 
 
  0.917
EDS07977.1
Hypothetical protein; KEGG: rno:309804 1.6e-08 Cdc2l6_predicted; cell division cycle 2-like 6 (CDK8-like) (predicted) K02208; COG: KOG3544 Collagens (type IV and type XIII), and related proteins; Psort location: Cytoplasmic, score: 8.87.
 
 0.887
IphP
KEGG: lwe:lwe1819 3.9e-43 protein-tyrosine phosphatase, putative K01104; COG: COG2365 Protein tyrosine/serine phosphatase; Psort location: Cytoplasmic, score: 8.87.
   
 
 0.842
EDS08604.1
Hypothetical protein.
    
 
 0.834
EDS07556.1
Hypothetical protein; KEGG: ddi:DDB0190674 5.8e-08 hypothetical protein K01146; COG: COG5651 PPE-repeat proteins.
 
 
  0.828
EDS06301.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
 
 
 0.806
EDS06332.1
Tetratricopeptide repeat protein; KEGG: mpe:MYPE6470 1.2e-26 parC; DNA topoisomerase IV subunit A K02621; COG: KOG1181 FOG: Low-complexity; Psort location: Extracellular, score: 7.62.
  
 
 0.788
EDS05482.1
Hypothetical protein; COG: NOG17819 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
  
 0.782
EDS08474.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
  
     0.772
EDS08473.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
  
     0.771
Your Current Organism:
Clostridium scindens
NCBI taxonomy Id: 411468
Other names: Clostridium scindens ATCC 35704, [. scindens ATCC 35704, [Clostridium] scindens ATCC 35704
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