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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS08305.1Flavin reductase; KEGG: ppu:PP_0236 0.00064 ssuE; NADH-dependent FMN reductase K00299; COG: COG0655 Multimeric flavodoxin WrbA. (251 aa)    
Predicted Functional Partners:
bphD
Hydrolase, alpha/beta domain protein; KEGG: rle:RL1292 5.0e-27 putative arylesterase K01045; COG: COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily); Psort location: Cytoplasmic, score: 9.36.
       0.775
EDS08307.1
Hypothetical protein; Psort location: Extracellular, score: 8.82.
       0.773
EDS08306.1
Hypothetical protein.
       0.572
EDS08308.1
DNA-binding helix-turn-helix protein; KEGG: mmo:MMOB3450 0.0013 dam; adenine-specific DNA methyltransferase K06223; COG: COG1476 Predicted transcriptional regulators; Psort location: Cytoplasmic, score: 8.87.
       0.507
EDS06261.1
Hypothetical protein.
  
     0.492
Your Current Organism:
Clostridium scindens
NCBI taxonomy Id: 411468
Other names: Clostridium scindens ATCC 35704, [. scindens ATCC 35704, [Clostridium] scindens ATCC 35704
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