Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
fucA_2Putative L-ribulose-5-phosphate 4-epimerase; KEGG: chy:CHY_1555 3.9e-43 fucA2; L-fuculose phosphate aldolase K01628; COG: COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases; Psort location: Cytoplasmic, score: 8.87. (223 aa)    
Predicted Functional Partners:
tpiA
Triose-phosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.
    
 0.908
XylB_7
KEGG: tma:TM0284 3.5e-42 sugar kinase, FGGY family K00854; COG: COG1070 Sugar (pentulose and hexulose) kinases; Psort location: Cytoplasmic, score: 8.87.
  
  
 0.812
pdxB-2
KEGG: hwa:HQ2066A 3.5e-58 serA; phosphoglycerate dehydrogenase K00058; COG: COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases; Psort location: Cytoplasmic, score: 9.65; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
  
    0.804
xylB_8
Carbohydrate kinase, FGGY family protein; KEGG: cac:CAC2612 1.8e-63 xylB; xylulose kinase K00854; COG: COG1070 Sugar (pentulose and hexulose) kinases; Psort location: Cytoplasmic, score: 8.87; Belongs to the FGGY kinase family.
  
  
 0.733
pdxB-3
KEGG: hwa:HQ2066A 2.6e-60 serA; phosphoglycerate dehydrogenase K00058; COG: COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases; Psort location: Cytoplasmic, score: 9.98; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
  
    0.721
fba
KEGG: cpf:CPF_1557 5.7e-113 fba; fructose-1,6-bisphosphate aldolase, class II K01624; COG: COG0191 Fructose/tagatose bisphosphate aldolase; Psort location: Cytoplasmic, score: 8.87.
    
 0.656
FbaA
Ketose-bisphosphate aldolase; KEGG: lmf:LMOf2365_2167 2.8e-79 fructose-bisphosphate aldolase, class II family K01624; COG: COG0191 Fructose/tagatose bisphosphate aldolase.
    
 0.656
fba_2
Ketose-bisphosphate aldolase; KEGG: mta:Moth_2404 5.7e-58 fructose-1,6-bisphosphate aldolase, class II K01624; COG: COG0191 Fructose/tagatose bisphosphate aldolase; Psort location: Cytoplasmic, score: 8.87.
    
 0.656
gatY
Ketose-bisphosphate aldolase; KEGG: chy:CHY_0128 3.9e-43 fba; fructose-1,6-bisphosphate aldolase, class II K01624; COG: COG0191 Fructose/tagatose bisphosphate aldolase; Psort location: Cytoplasmic, score: 8.87.
    
 0.656
Fda_2
Putative fructose-1,6-bisphosphate aldolase; KEGG: tde:TDE0340 4.5e-49 fructose-bisphosphate aldolase, class-I K01623; COG: COG3588 Fructose-1,6-bisphosphate aldolase; Psort location: Cytoplasmic, score: 8.87.
     
  0.650
Your Current Organism:
Clostridium scindens
NCBI taxonomy Id: 411468
Other names: Clostridium scindens ATCC 35704, [. scindens ATCC 35704, [Clostridium] scindens ATCC 35704
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