Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EDS07811.1Hypothetical protein; KEGG: pae:PA0995 0.0053 ogt; methylated-DNA--protein-cysteine methyltransferase K00567. (105 aa)    
Predicted Functional Partners:
EDS07810.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
       0.773
AraD
KEGG: bld:BLi02063 3.6e-79 putative L-ribulose-5-phosphate 4-epimerase; RBL00998 K03077; COG: COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases.
       0.527
araB
Carbohydrate kinase, FGGY family protein; KEGG: lsa:LSA1859 2.2e-159 araB; L-ribulokinase K00853; COG: COG1070 Sugar (pentulose and hexulose) kinases; Psort location: Cytoplasmic, score: 8.87.
       0.460
rhaB
Rhamnulokinase; KEGG: oih:OB0495 6.0e-118 rhamnulokinase K00848; COG: COG1070 Sugar (pentulose and hexulose) kinases; Psort location: Cytoplasmic, score: 8.87.
       0.409
Your Current Organism:
Clostridium scindens
NCBI taxonomy Id: 411468
Other names: Clostridium scindens ATCC 35704, [. scindens ATCC 35704, [Clostridium] scindens ATCC 35704
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