Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ptsI_1PEP-utilizing enzyme, TIM barrel domain protein; KEGG: blo:BL0411 6.4e-46 ptsI; phosphoenolpyruvate-protein phosphotransferase K02766; COG: COG1080 Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria); Psort location: Cytoplasmic, score: 9.98; Belongs to the PEP-utilizing enzyme family. (213 aa)    
Predicted Functional Partners:
ptsH_1
Phosphocarrier, HPr family; KEGG: aha:AHA_3039 4.3e-12 ptsH; phosphocarrier protein PtsH K00890; COG: COG1925 Phosphotransferase system, HPr-related proteins; Psort location: Cytoplasmic, score: 9.65.
 
 
 0.926
ptsH_2
Phosphocarrier, HPr family; KEGG: aha:AHA_2348 5.1e-10 multiphosphoryl transfer protein (MTP) (phosphotransferase FPrprotein) (pseudo-HPr) K00924; COG: COG1925 Phosphotransferase system, HPr-related proteins; Psort location: Cytoplasmic, score: 9.98.
 
 
 0.912
FruA
KEGG: cpr:CPR_0550 3.4e-163 fructose specific permease K00890; COG: COG1299 Phosphotransferase system, fructose-specific IIC component; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.896
Crh
Phosphocarrier, HPr family; KEGG: btl:BALH_4643 1.6e-12 ptsH; phosphocarrier protein HPr K00889; COG: COG1925 Phosphotransferase system, HPr-related proteins; Psort location: Cytoplasmic, score: 9.98.
 
 
 0.870
tuf
Translation elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
  
  
 0.663
pfkB-2
1-phosphofructokinase; KEGG: cno:NT01CX_1725 2.2e-88 1-phosphofructokinase K00882; COG: COG1105 Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB); Belongs to the carbohydrate kinase PfkB family. LacC subfamily.
 
  
 0.550
pfkB
1-phosphofructokinase; KEGG: cac:CAC2951 1.0e-58 lacC; tagatose-6-phosphate kinase K00917; COG: COG1105 Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB); Psort location: Cytoplasmic, score: 8.87; Belongs to the carbohydrate kinase PfkB family. LacC subfamily.
 
  
 0.535
EDS08709.1
Hypothetical protein; KEGG: btl:BALH_3665 0.00019 ptsH; phosphocarrier protein HPr K00889; Psort location: Cytoplasmic, score: 8.87.
  
 
 0.528
EDS07316.1
Hypothetical protein; KEGG: spt:SPA0645 0.0018 fruB; fructose-specific IIA/FPR component of PTS system K02768:K02784.
  
 
 0.527
EDS05736.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
  
 
 0.527
Your Current Organism:
Clostridium scindens
NCBI taxonomy Id: 411468
Other names: Clostridium scindens ATCC 35704, [. scindens ATCC 35704, [Clostridium] scindens ATCC 35704
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