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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS07821.1Hypothetical protein. (62 aa)    
Predicted Functional Partners:
feoB-2
Ferrous iron transport protein B; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family.
       0.723
feoA
FeoA domain protein; COG: COG1918 Fe2+ transport system protein A; Psort location: Cytoplasmic, score: 8.87.
       0.689
EDS07824.1
FeoA domain protein; COG: COG1918 Fe2+ transport system protein A; Psort location: Cytoplasmic, score: 8.87.
       0.661
EDS07825.1
Amidohydrolase family protein; COG: NOG27356 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
       0.406
iolG
Oxidoreductase, NAD-binding domain protein; KEGG: sus:Acid_1485 1.2e-27 inositol 2-dehydrogenase K00010; COG: COG0673 Predicted dehydrogenases and related proteins; Psort location: Cytoplasmic, score: 8.87.
       0.406
Your Current Organism:
Clostridium scindens
NCBI taxonomy Id: 411468
Other names: Clostridium scindens ATCC 35704, [. scindens ATCC 35704, [Clostridium] scindens ATCC 35704
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