close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS07825.1Amidohydrolase family protein; COG: NOG27356 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87. (322 aa)    
Predicted Functional Partners:
iolG
Oxidoreductase, NAD-binding domain protein; KEGG: sus:Acid_1485 1.2e-27 inositol 2-dehydrogenase K00010; COG: COG0673 Predicted dehydrogenases and related proteins; Psort location: Cytoplasmic, score: 8.87.
  
  
 0.790
EDS05048.1
Hypothetical protein; COG: NOG08696 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
  
    0.731
ycjP_2
KEGG: cya:CYA_1846 1.7e-06 modB; molybdate ABC transporter, permease protein K02018; COG: COG0395 ABC-type sugar transport system, permease component; Psort location: CytoplasmicMembrane, score: 10.00.
       0.697
ycjO_1
KEGG: pac:PPA0505 4.8e-05 ABC transporter, putative molybdenum transport system K02017:K02018; COG: COG1175 ABC-type sugar transport systems, permease components; Psort location: CytoplasmicMembrane, score: 10.00.
       0.697
EDS06033.1
Hypothetical protein; COG: COG0399 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; Psort location: Cytoplasmic, score: 8.87.
 
    0.688
EDS06731.1
Hypothetical protein; KEGG: pab:PAB0967 1.7e-21 ADP-specific glucokinase K08074; COG: COG4809 Archaeal ADP-dependent phosphofructokinase/glucokinase; Psort location: Cytoplasmic, score: 8.87.
  
     0.642
malX
ABC transporter, solute-binding protein; KEGG: eci:UTI89_C1581 0.00013 ycjN; putative ABC transporter periplasmic binding protein YcjN precursor K02027; COG: COG1653 ABC-type sugar transport system, periplasmic component.
       0.623
EDS08033.1
LPXTG-motif cell wall anchor domain protein; KEGG: ecj:JW2924 0.0013 ansB; periplasmic L-asparaginase II K01424; COG: NOG22227 non supervised orthologous group; Psort location: Cellwall, score: 9.98.
  
     0.619
EDS06742.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
 
     0.608
mdtA
Efflux transporter, RND family, MFP subunit; KEGG: cal:orf19.7201 0.00079 SLA2; structural constituent of cytoskeleton K00870; COG: COG0845 Membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
     0.588
Your Current Organism:
Clostridium scindens
NCBI taxonomy Id: 411468
Other names: Clostridium scindens ATCC 35704, [. scindens ATCC 35704, [Clostridium] scindens ATCC 35704
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.