Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EDS07876.1Hypothetical protein; KEGG: cpe:CPE0858 7.4e-33 bdhA; NADH-dependent butanol dehydrogenase K00100; COG: COG1979 Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family; Psort location: Cytoplasmic, score: 9.65. (120 aa)    
Predicted Functional Partners:
adh2_1
Hypothetical protein; KEGG: cpe:CPE0858 3.1e-14 bdhA; NADH-dependent butanol dehydrogenase K00100; COG: COG1979 Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family; Psort location: Cytoplasmic, score: 8.87.
     0.961
EDS07875.1
Hypothetical protein; KEGG: cpe:CPE0858 0.00043 bdhA; NADH-dependent butanol dehydrogenase K00100.
 
     0.809
guaA
GMP synthase (glutamine-hydrolyzing) domain protein; Catalyzes the synthesis of GMP from XMP.
  
    0.665
guaA-2
GMP synthase (glutamine-hydrolyzing) domain protein; KEGG: bth:BT2419 2.8e-184 putative GMP synthase [glutamine-hydrolyzing] K01951; COG: COG0518 GMP synthase - Glutamine amidotransferase domain; Psort location: Cytoplasmic, score: 8.87.
  
    0.665
YurK_2
UbiC transcription regulator-associated domain protein; KEGG: mtc:MT0817 2.6e-14 dihydrolipoamide dehydrogenase K00382; COG: COG2188 Transcriptional regulators; Psort location: Cytoplasmic, score: 8.87.
       0.578
EDS07878.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
       0.450
draG_2
ADP-ribosylglycohydrolase; KEGG: ser:SERP2218 3.6e-79 ADP-ribosylglycohydrolase, putative K05521; COG: COG1397 ADP-ribosylglycohydrolase.
       0.421
rbsK_2
Kinase, PfkB family; KEGG: cdi:DIP0655 9.2e-19 putative ribokinase K00852; COG: COG0524 Sugar kinases, ribokinase family; Psort location: Cytoplasmic, score: 9.98; Belongs to the carbohydrate kinase PfkB family.
       0.414
Your Current Organism:
Clostridium scindens
NCBI taxonomy Id: 411468
Other names: Clostridium scindens ATCC 35704, [. scindens ATCC 35704, [Clostridium] scindens ATCC 35704
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