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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ctpCKEGG: dvu:DVU3332 3.5e-145 heavy metal translocating P-type ATPase; COG: COG2217 Cation transport ATPase; Psort location: CytoplasmicMembrane, score: 9.49. (693 aa)    
Predicted Functional Partners:
EDS07907.1
Hypothetical protein; KEGG: nph:NP1018A 0.0013 atpH; H(+)-transporting two-sector ATPase subunit H.a (A-type ATP synthase) K02121.
 
     0.962
copZ
Heavy metal-associated domain protein; KEGG: bpm:BURPS1710b_A1755 1.7e-07 cueA; copper-translocating P-type ATPase K01533; COG: COG2608 Copper chaperone.
 
 
 0.859
copA
Copper-exporting ATPase; KEGG: efa:EF0298 2.0e-194 copper-translocating P-type ATPase K01533; COG: COG2217 Cation transport ATPase; Psort location: CytoplasmicMembrane, score: 9.99.
 
 
0.748
ziaR
KEGG: rru:Rru_A1450 5.9e-09 transcriptional regulator, ArsR family; COG: COG0640 Predicted transcriptional regulators; Psort location: Cytoplasmic, score: 8.87.
 
  
 0.715
Fur_1
Hypothetical protein; COG: COG0735 Fe2+/Zn2+ uptake regulation proteins; Psort location: Cytoplasmic, score: 8.87; Belongs to the Fur family.
 
   
 0.610
nifJ
Pyruvate synthase; KEGG: cno:NT01CX_1854 0. nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase K00168; COG: COG1013 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit; Psort location: Cytoplasmic, score: 8.87.
  
  
 0.566
EDS07914.1
Flavodoxin; KEGG: rsp:RSP_3191 2.2e-09 fprA; flavodoxin; COG: COG0716 Flavodoxins.
  
     0.405
Your Current Organism:
Clostridium scindens
NCBI taxonomy Id: 411468
Other names: Clostridium scindens ATCC 35704, [. scindens ATCC 35704, [Clostridium] scindens ATCC 35704
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