Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
feoB-3Ferrous iron transport protein B; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family. (668 aa)    
Predicted Functional Partners:
EDS07911.1
FeoA domain protein.
 
  
 0.893
feoA
FeoA domain protein; COG: COG1918 Fe2+ transport system protein A; Psort location: Cytoplasmic, score: 8.87.
 
  
 0.853
EDS08410.1
FeoA domain protein; COG: NOG16873 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
 
  
 0.720
copZ
Heavy metal-associated domain protein; KEGG: bpm:BURPS1710b_A1755 1.7e-07 cueA; copper-translocating P-type ATPase K01533; COG: COG2608 Copper chaperone.
  
  
 0.595
feoB-4
Ferrous iron transport protein B; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family.
 
  
0.551
EDS07824.1
FeoA domain protein; COG: COG1918 Fe2+ transport system protein A; Psort location: Cytoplasmic, score: 8.87.
  
  
 0.547
Fur_1
Hypothetical protein; COG: COG0735 Fe2+/Zn2+ uptake regulation proteins; Psort location: Cytoplasmic, score: 8.87; Belongs to the Fur family.
     
 0.546
nifJ
Pyruvate synthase; KEGG: cno:NT01CX_1854 0. nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase K00168; COG: COG1013 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit; Psort location: Cytoplasmic, score: 8.87.
 
   
 0.535
EDS04948.1
FeoA domain protein; Psort location: Cytoplasmic, score: 8.87.
  
  
 0.473
Your Current Organism:
Clostridium scindens
NCBI taxonomy Id: 411468
Other names: Clostridium scindens ATCC 35704, [. scindens ATCC 35704, [Clostridium] scindens ATCC 35704
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