close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS08026.1Hypothetical protein; KEGG: mxa:MXAN_2567 0.00016 peptidase, M50A (S2P protease) subfamily; COG: COG5295 Autotransporter adhesin. (315 aa)    
Predicted Functional Partners:
SipW_1
KEGG: cpr:CPR_0480 6.3e-20 peptidase, putative K03100; COG: COG0681 Signal peptidase I; Psort location: CytoplasmicMembrane, score: 9.75.
       0.786
EDS08027.1
Hypothetical protein.
       0.664
EDS08028.1
Hypothetical protein.
       0.648
EDS08029.1
Hypothetical protein.
       0.642
EDS08030.1
Hypothetical protein; KEGG: oih:OB2434 0.0060 eno; enolase K01689.
       0.611
EDS08031.1
COG: COG3764 Sortase (surface protein transpeptidase); Psort location: CytoplasmicMembrane, score: 9.87.
       0.579
EDS08032.1
COG: COG3764 Sortase (surface protein transpeptidase).
       0.579
EDS08033.1
LPXTG-motif cell wall anchor domain protein; KEGG: ecj:JW2924 0.0013 ansB; periplasmic L-asparaginase II K01424; COG: NOG22227 non supervised orthologous group; Psort location: Cellwall, score: 9.98.
       0.436
Your Current Organism:
Clostridium scindens
NCBI taxonomy Id: 411468
Other names: Clostridium scindens ATCC 35704, [. scindens ATCC 35704, [Clostridium] scindens ATCC 35704
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.