Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDS07776.1PhoH family protein; KEGG: reh:H16_A0527 2.1e-21 phoH; phosphate starvation-inducible protein PhoH,predicted ATPase; COG: COG1875 Predicted ATPase related to phosphate starvation-inducible protein PhoH; Psort location: Cytoplasmic, score: 9.98. (210 aa)    
Predicted Functional Partners:
EDS05948.1
Hypothetical protein; COG: COG1875 Predicted ATPase related to phosphate starvation-inducible protein PhoH; Psort location: Cytoplasmic, score: 8.87.
 
     0.975
EDS07777.1
HDIG domain protein; COG: NOG09580 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
       0.737
EDS07778.1
Hypothetical protein; COG: NOG21935 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
       0.435
EDS07774.1
Hypothetical protein; COG: COG4584 Transposase and inactivated derivatives; Psort location: Cytoplasmic, score: 8.87.
       0.430
EDS07775.1
Hypothetical protein; COG: COG4584 Transposase and inactivated derivatives; Psort location: Cytoplasmic, score: 8.87.
       0.430
EDS07779.1
Putative ATP synthase F0, A subunit; COG: COG2270 Permeases of the major facilitator superfamily; Psort location: CytoplasmicMembrane, score: 10.00.
       0.417
Your Current Organism:
Clostridium scindens
NCBI taxonomy Id: 411468
Other names: Clostridium scindens ATCC 35704, [. scindens ATCC 35704, [Clostridium] scindens ATCC 35704
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