Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDS07621.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.87. (72 aa)    
Predicted Functional Partners:
EDS07622.1
Hypothetical protein; COG: NOG34358 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
 
     0.880
EDS07620.1
Hypothetical protein.
 
     0.743
EDS08775.1
Hypothetical protein.
  
     0.728
EDS05586.1
Hypothetical protein.
  
     0.727
EDS05284.1
Hypothetical protein.
 
     0.653
EDS06192.1
Hypothetical protein; KEGG: lac:LBA1588 0.00036 prtM; PrtM precursor K07533; Psort location: Cytoplasmic, score: 8.87.
 
     0.592
EDS05283.1
Hypothetical protein; COG: COG3505 Type IV secretory pathway, VirD4 components; Psort location: Cytoplasmic, score: 8.87.
 
     0.582
EDS05585.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
  
     0.564
EDS05286.1
Hypothetical protein; COG: NOG34358 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
 
     0.543
EDS08774.1
Hypothetical protein.
  
     0.541
Your Current Organism:
Clostridium scindens
NCBI taxonomy Id: 411468
Other names: Clostridium scindens ATCC 35704, [. scindens ATCC 35704, [Clostridium] scindens ATCC 35704
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.