Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDS07631.1Hypothetical protein. (84 aa)    
Predicted Functional Partners:
FtsL_2
Hypothetical protein.
 
     0.807
EDS07655.1
Hypothetical protein; KEGG: tte:TTE2564 2.6e-11 surA2; parvulin-like peptidyl-prolyl isomerase K07533; COG: COG0760 Parvulin-like peptidyl-prolyl isomerase.
  
     0.764
EDS06301.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
  
     0.754
EDS08472.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
  
     0.751
EDS04944.1
Hypothetical protein; KEGG: rle:RL2226 0.0022 cdsA; putative phosphatidate cytidylyltransferase K00981; COG: NOG07239 non supervised orthologous group; Psort location: CytoplasmicMembrane, score: 9.99.
  
     0.746
EDS08474.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
  
     0.745
EDS06332.1
Tetratricopeptide repeat protein; KEGG: mpe:MYPE6470 1.2e-26 parC; DNA topoisomerase IV subunit A K02621; COG: KOG1181 FOG: Low-complexity; Psort location: Extracellular, score: 7.62.
  
     0.744
EDS08473.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
  
     0.727
EDS07956.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
  
     0.725
EDS06305.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
  
     0.713
Your Current Organism:
Clostridium scindens
NCBI taxonomy Id: 411468
Other names: Clostridium scindens ATCC 35704, [. scindens ATCC 35704, [Clostridium] scindens ATCC 35704
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