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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS07734.1Putative DNA metabolism protein; KEGG: ccr:CC2333 1.7e-05 phage SPO1 DNA polymerase-related protein K02334; COG: COG1573 Uracil-DNA glycosylase; Psort location: Cytoplasmic, score: 8.87. (255 aa)    
Predicted Functional Partners:
EDS07733.1
Putative DNA modification/repair radical SAM protein; COG: COG4277 Predicted DNA-binding protein with the Helix-hairpin-helix motif; Psort location: Cytoplasmic, score: 8.87.
 
  
 0.965
EDS07735.1
DEAD2 domain protein; KEGG: mja:MJ0942 7.3e-20 dinG; ATP-dependent DNA helicase DinG, putative K01529; COG: COG1199 Rad3-related DNA helicases; Psort location: Cytoplasmic, score: 8.87.
 
   
 0.671
yeaZ
Universal bacterial protein YeaZ; KEGG: ctc:CTC02444 6.5e-41 O-sialoglycoprotein endopeptidase K01409; COG: COG1214 Inactive homolog of metal-dependent proteases, putative molecular chaperone; Psort location: Cytoplasmic, score: 8.87.
  
    0.571
EDS07732.1
Hypothetical protein; COG: COG1309 Transcriptional regulator; Psort location: Cytoplasmic, score: 8.87.
       0.542
EDS07543.1
KEGG: tte:TTE1208 6.1e-148 pycA; Pyruvate carboxylase, C-terminal domain/subunit K01960; COG: COG5016 Pyruvate/oxaloacetate carboxyltransferase; Psort location: Cytoplasmic, score: 8.87.
  
    0.536
EDS07659.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.99.
  
     0.458
EDS05074.1
COG: COG0629 Single-stranded DNA-binding protein; Psort location: Cytoplasmic, score: 8.87.
 
 
   0.427
EDS07731.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
       0.416
Your Current Organism:
Clostridium scindens
NCBI taxonomy Id: 411468
Other names: Clostridium scindens ATCC 35704, [. scindens ATCC 35704, [Clostridium] scindens ATCC 35704
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