Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EDS07747.1Hypothetical protein; KEGG: hpa:HPAG1_0272 9.2e-06 hypothetical protein; COG: COG2121 Uncharacterized protein conserved in bacteria; Psort location: Cytoplasmic, score: 8.87. (186 aa)    
Predicted Functional Partners:
EDS07746.1
Glycosyltransferase, group 1 family protein; KEGG: azo:azo0965 1.6e-44 glycosyltransferase; COG: COG0438 Glycosyltransferase; Psort location: Cytoplasmic, score: 8.87.
 
     0.803
YqjA
SNARE-like domain protein; KEGG: sab:SAB2386 1.4e-20 probable alkaline phosphatase K01077; COG: COG0586 Uncharacterized membrane-associated protein; Psort location: CytoplasmicMembrane, score: 9.99.
       0.708
PhoR_6
KEGG: cpf:CPF_0460 6.9e-117 sensor histidine kinase; COG: COG0642 Signal transduction histidine kinase; Psort location: CytoplasmicMembrane, score: 10.00.
       0.656
walR_9
Response regulator receiver domain protein; KEGG: fal:FRAAL1628 1.6e-39 response regulator in two-component regulatory system; COG: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; Psort location: Cytoplasmic, score: 9.98.
       0.651
EDS07744.1
Hypothetical protein; Psort location: Extracellular, score: 8.82.
       0.458
Your Current Organism:
Clostridium scindens
NCBI taxonomy Id: 411468
Other names: Clostridium scindens ATCC 35704, [. scindens ATCC 35704, [Clostridium] scindens ATCC 35704
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