Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EDS07757.1Hypothetical protein. (58 aa)    
Predicted Functional Partners:
EDS07755.1
Hypothetical protein; KEGG: hsa:8399 0.0079 PLA2G10; phospholipase A2, group X K01047; Psort location: Cytoplasmic, score: 8.87.
       0.773
EDS07756.1
Hypothetical protein.
       0.572
glnS
glutamine--tRNA ligase; KEGG: cno:NT01CX_0275 5.9e-198 glnS; glutaminyl-tRNA synthetase K01886; COG: COG0008 Glutamyl- and glutaminyl-tRNA synthetases; Psort location: Cytoplasmic, score: 9.98.
       0.481
gabR
KEGG: fnu:FN1462 6.5e-89 transcriptional regulator, GntR family K00375; COG: COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs; Psort location: Cytoplasmic, score: 9.98.
       0.478
Your Current Organism:
Clostridium scindens
NCBI taxonomy Id: 411468
Other names: Clostridium scindens ATCC 35704, [. scindens ATCC 35704, [Clostridium] scindens ATCC 35704
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