Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDS07569.1Sporulation protein YtfJ; COG: COG3874 Uncharacterized conserved protein. (133 aa)    
Predicted Functional Partners:
EDS07568.1
Hypothetical protein; KEGG: osa:3131434 0.0030 rpoC2; RNA polymerase beta'' chain K03046; COG: NOG12748 non supervised orthologous group; Psort location: CytoplasmicMembrane, score: 7.80.
 
     0.940
EDS07567.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
 
     0.816
pbpA
Penicillin-binding protein, transpeptidase domain protein; KEGG: mta:Moth_0911 8.7e-62 peptidoglycan glycosyltransferase K05364; COG: COG0768 Cell division protein FtsI/penicillin-binding protein 2; Psort location: CytoplasmicMembrane, score: 9.82.
 
    0.751
EDS05745.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.75.
  
     0.748
zapA
Hypothetical protein; Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division.
 
     0.722
EDS07942.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
  
     0.715
mecB
COG: COG4862 Negative regulator of genetic competence, sporulation and motility; Psort location: Cytoplasmic, score: 8.87.
  
     0.708
mreD
Rod shape-determining protein MreD; COG: NOG16883 non supervised orthologous group; Psort location: CytoplasmicMembrane, score: 9.99.
  
     0.692
rodA_2
Cell cycle protein, FtsW/RodA/SpoVE family; COG: COG0772 Bacterial cell division membrane protein; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the SEDS family.
 
     0.667
EDS06654.1
KEGG: cyb:CYB_1515 0.0081 tetratricopeptide repeat/protein kinase domain protein K08884; COG: COG0457 FOG: TPR repeat.
  
     0.663
Your Current Organism:
Clostridium scindens
NCBI taxonomy Id: 411468
Other names: Clostridium scindens ATCC 35704, [. scindens ATCC 35704, [Clostridium] scindens ATCC 35704
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.