STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS07366.1Hypothetical protein. (73 aa)    
Predicted Functional Partners:
EDS07367.1
Hypothetical protein.
       0.773
EDS07368.1
MT-A70; KEGG: spj:MGAS2096_Spy1128 2.2e-56 adenine-specific methyltransferase K00571; COG: COG4725 Transcriptional activator, adenine-specific DNA methyltransferase; Psort location: Cytoplasmic, score: 8.87; Belongs to the MT-A70-like family.
       0.686
EDS07369.1
Hypothetical protein; KEGG: pfl:PFL_3331 0.0029 nudF; ADP-ribose pyrophosphatase K01515; COG: NOG16905 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
       0.686
EDS07365.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
       0.545
EDS07371.1
Transglycosylase SLT domain protein; KEGG: sat:SYN_01413 3.3e-09 soluble lytic murein transglycosylase K01238; COG: COG0419 ATPase involved in DNA repair; Psort location: Cytoplasmic, score: 8.87.
  
  
 0.436
EDS07370.1
Hypothetical protein; KEGG: pub:SAR11_0340 0.0040 coaE; dephospho-CoA kinase K00859; Psort location: Cytoplasmic, score: 8.87.
       0.428
Your Current Organism:
Clostridium scindens
NCBI taxonomy Id: 411468
Other names: Clostridium scindens ATCC 35704, [. scindens ATCC 35704, [Clostridium] scindens ATCC 35704
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.