Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EDS07371.1Transglycosylase SLT domain protein; KEGG: sat:SYN_01413 3.3e-09 soluble lytic murein transglycosylase K01238; COG: COG0419 ATPase involved in DNA repair; Psort location: Cytoplasmic, score: 8.87. (263 aa)    
Predicted Functional Partners:
EDS07370.1
Hypothetical protein; KEGG: pub:SAR11_0340 0.0040 coaE; dephospho-CoA kinase K00859; Psort location: Cytoplasmic, score: 8.87.
       0.773
EDS07373.1
VRR-NUC domain protein.
 
     0.578
scpA
ScpA/B protein; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves.
  
 
 0.546
parA
CobQ/CobB/MinD/ParA nucleotide binding domain protein; KEGG: cch:Cag_1803 5.1e-25 ATPase, ParA family K03496; COG: COG1192 ATPases involved in chromosome partitioning; Psort location: Cytoplasmic, score: 8.87.
  
  
 0.518
epsJ_1
Glycosyltransferase, group 2 family protein; KEGG: gbe:GbCGDNIH1_2152 2.1e-47 glycosyltransferase K00754; COG: COG0463 Glycosyltransferases involved in cell wall biogenesis; Psort location: Cytoplasmic, score: 8.87.
 
  
 0.518
EDS07369.1
Hypothetical protein; KEGG: pfl:PFL_3331 0.0029 nudF; ADP-ribose pyrophosphatase K01515; COG: NOG16905 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
  
    0.504
EDS07368.1
MT-A70; KEGG: spj:MGAS2096_Spy1128 2.2e-56 adenine-specific methyltransferase K00571; COG: COG4725 Transcriptional activator, adenine-specific DNA methyltransferase; Psort location: Cytoplasmic, score: 8.87; Belongs to the MT-A70-like family.
   
   0.499
EDS07374.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
       0.494
secD
Export membrane protein SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily.
  
  
 0.487
EDS07375.1
Hypothetical protein.
       0.470
Your Current Organism:
Clostridium scindens
NCBI taxonomy Id: 411468
Other names: Clostridium scindens ATCC 35704, [. scindens ATCC 35704, [Clostridium] scindens ATCC 35704
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