Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EDS07226.1Hypothetical protein; COG: COG1943 Transposase and inactivated derivatives; Psort location: Cytoplasmic, score: 8.87. (242 aa)    
Predicted Functional Partners:
kbl
Glycine C-acetyltransferase; Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA.
       0.452
apeA_1
Aminopeptidase I zinc metalloprotease (M18); KEGG: cac:CAC1091 6.6e-151 aspartyl aminopeptidase K01269; COG: COG1362 Aspartyl aminopeptidase; Psort location: Cytoplasmic, score: 8.87.
       0.444
tdh
L-threonine 3-dehydrogenase; Catalyzes the NAD(+)-dependent oxidation of L-threonine to 2- amino-3-ketobutyrate; Belongs to the zinc-containing alcohol dehydrogenase family.
       0.406
comC
Bacterial peptidase A24, N-terminal domain protein; KEGG: tte:TTE1266 3.5e-42 pppA; leader peptidase (prepilin peptidase) / N-methyltransferase K02654; COG: COG1989 Type II secretory pathway, prepilin signal peptidase PulO and related peptidases; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.400
Your Current Organism:
Clostridium scindens
NCBI taxonomy Id: 411468
Other names: Clostridium scindens ATCC 35704, [. scindens ATCC 35704, [Clostridium] scindens ATCC 35704
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