Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EDS07257.1Hypothetical protein; COG: NOG32083 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87. (207 aa)    
Predicted Functional Partners:
EDS07256.1
Hypothetical protein; KEGG: lpl:lp_1381 1.0e-26 astA; arylsulfate sulfotransferase K01023; COG: NOG14107 non supervised orthologous group.
       0.554
EDS06761.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 7.80.
  
     0.522
EDS06316.1
Hypothetical protein; KEGG: bba:Bd1032 0.0026 mepA; hypothetical protein K07261; Psort location: CytoplasmicMembrane, score: 7.63.
  
     0.507
EDS07743.1
Hypothetical protein; KEGG: fnu:FN1041 2.0e-12 acetyltransferase K00680; COG: COG4552 Predicted acetyltransferase involved in intracellular survival and related acetyltransferases; Psort location: Cytoplasmic, score: 8.87.
  
     0.500
EDS06760.1
Hypothetical protein; COG: COG1106 Predicted ATPases; Psort location: Cytoplasmic, score: 8.87.
  
     0.499
proC-2
Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.
       0.465
EDS07084.1
Hypothetical protein; COG: COG4866 Uncharacterized conserved protein; Psort location: Cytoplasmic, score: 8.87.
  
     0.427
EDS06723.1
COG: COG4709 Predicted membrane protein; Psort location: CytoplasmicMembrane, score: 9.75.
  
     0.406
Your Current Organism:
Clostridium scindens
NCBI taxonomy Id: 411468
Other names: Clostridium scindens ATCC 35704, [. scindens ATCC 35704, [Clostridium] scindens ATCC 35704
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