Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDS07277.1Hypothetical protein; Psort location: Extracellular, score: 8.82. (40 aa)    
Predicted Functional Partners:
EDS07278.1
Hypothetical protein.
       0.773
EDS07276.1
Sortase B cell surface sorting signal; Psort location: Cellwall, score: 9.97.
       0.620
recD2_1
Hypothetical protein; KEGG: dde:Dde_2725 1.4e-26 helicase RecD/TraA K03581; COG: COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member; Psort location: Cytoplasmic, score: 8.87.
       0.585
EDS07275.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
       0.585
EDS07279.1
Hypothetical protein; Psort location: Extracellular, score: 8.82.
       0.505
Your Current Organism:
Clostridium scindens
NCBI taxonomy Id: 411468
Other names: Clostridium scindens ATCC 35704, [. scindens ATCC 35704, [Clostridium] scindens ATCC 35704
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.