Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EDS07045.1KEGG: tte:TTE2193 1.6e-46 porG3; indolepyruvate ferredoxin oxidoreductase, beta subunit K00180; COG: COG1014 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit; Psort location: Cytoplasmic, score: 8.87. (189 aa)    
Predicted Functional Partners:
nifJ
Pyruvate synthase; KEGG: cno:NT01CX_1854 0. nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase K00168; COG: COG1013 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit; Psort location: Cytoplasmic, score: 8.87.
  
 
 0.980
iorA
Indolepyruvate ferredoxin oxidoreductase, alpha subunit; Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates.
 
 
 0.972
EDS07044.1
ACT domain protein; KEGG: afu:AF1672 1.7e-26 acetolactate synthase small subunit K01653; COG: COG4747 ACT domain-containing protein; Psort location: Cytoplasmic, score: 8.87.
 
    0.888
EDS07042.1
ACT domain protein; KEGG: sat:SYN_01196 9.6e-24 acetolactate synthase small subunit K01651; COG: COG4747 ACT domain-containing protein; Psort location: Cytoplasmic, score: 8.87.
 
    0.865
iorA-2
Indolepyruvate ferredoxin oxidoreductase, alpha subunit; Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates.
 
 
 0.854
EDS07047.1
Hypothetical protein; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA).
 
    0.830
EDS07043.1
Hypothetical protein; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA).
 
    0.773
hndC_1
4Fe-4S binding domain protein; KEGG: tte:TTE0893 3.3e-243 nuoF; NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit K00335; COG: COG1894 NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit; Psort location: Cytoplasmic, score: 9.98.
  
 
 0.670
hndC_3
4Fe-4S binding domain protein; KEGG: swo:Swol_1701 3.0e-194 NADH dehydrogenase (quinone) K05903; COG: COG1894 NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit; Psort location: Cytoplasmic, score: 9.98.
  
 
 0.645
hndC_2
4Fe-4S binding domain protein; KEGG: mth:MTH926 2.4e-13 tungsten formylmethanofuran dehydrogenase, subunit F homolog K00205; COG: COG1145 Ferredoxin; Psort location: Cytoplasmic, score: 8.87.
  
 
 0.541
Your Current Organism:
Clostridium scindens
NCBI taxonomy Id: 411468
Other names: Clostridium scindens ATCC 35704, [. scindens ATCC 35704, [Clostridium] scindens ATCC 35704
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